[arch-commits] Commit in emboss/trunk (PKGBUILD)
Ronald van Haren
ronald at archlinux.org
Thu Oct 30 22:50:42 UTC 2008
Date: Thursday, October 30, 2008 @ 18:50:42
Author: ronald
Revision: 17545
upgpkg: emboss 6.0.1-1
Modified:
emboss/trunk/PKGBUILD
----------+
PKGBUILD | 13 ++++++-------
1 file changed, 6 insertions(+), 7 deletions(-)
Modified: PKGBUILD
===================================================================
--- PKGBUILD 2008-10-30 22:40:52 UTC (rev 17544)
+++ PKGBUILD 2008-10-30 22:50:42 UTC (rev 17545)
@@ -2,24 +2,23 @@
# Maintainer: damir <damir at archlinux.org>
pkgname=emboss
orgname=EMBOSS
-pkgver=5.0.0
+pkgver=6.0.1
pkgrel=1
pkgdesc="A collection of molecular biology applications"
arch=(i686 x86_64)
url="http://emboss.sourceforge.net/"
-depends=('gd' 'libx11' 'pcre' 'perl' 'jre')
-makedepends=('jdk')
+depends=('gd' 'libx11' 'pcre' 'perl' 'openjdk6')
options=("!libtool")
license=('GPL2')
source=(ftp://emboss.open-bio.org/pub/EMBOSS/$orgname-$pkgver.tar.gz)
-md5sums=('be4c895220ad34afd65d450ba7d8e34b')
+md5sums=('2182b148dace6bea403deed8facae40d')
build() {
cd $startdir/src/$orgname-$pkgver
- source /etc/profile.d/jdk.sh
- CFLAGS="${CFLAGS} -I/opt/java/include"
+# source /etc/profile.d/jdk.sh
+ CFLAGS="${CFLAGS} -I/usr/lib/jvm/java-1.6.0-openjdk/include/"
./configure --prefix=/usr --enable-large --with-x \
- --with-javaos=/opt/java/include/linux/ --with-java=/opt/java/
+ --with-javaos=/usr/lib/jvm/java-1.6.0-openjdk/include//linux/
make || return 1
make prefix=$startdir/pkg/usr install
rm -f $startdir/pkg/usr/include/{pcre,pcreposix}.h
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