[arch-commits] Commit in python-pytables/repos (6 files)

Ronald van Haren ronald at archlinux.org
Tue May 24 11:50:33 UTC 2016


    Date: Tuesday, May 24, 2016 @ 13:50:32
  Author: ronald
Revision: 176213

archrelease: copy trunk to extra-i686, extra-x86_64

Added:
  python-pytables/repos/extra-i686/
  python-pytables/repos/extra-i686/PKGBUILD
    (from rev 176212, python-pytables/trunk/PKGBUILD)
  python-pytables/repos/extra-i686/hdf5_18.patch
    (from rev 176212, python-pytables/trunk/hdf5_18.patch)
  python-pytables/repos/extra-x86_64/
  python-pytables/repos/extra-x86_64/PKGBUILD
    (from rev 176212, python-pytables/trunk/PKGBUILD)
  python-pytables/repos/extra-x86_64/hdf5_18.patch
    (from rev 176212, python-pytables/trunk/hdf5_18.patch)

----------------------------+
 extra-i686/PKGBUILD        |   77 +++++++++++++++++++++++++++++++++++++++++++
 extra-i686/hdf5_18.patch   |   14 +++++++
 extra-x86_64/PKGBUILD      |   77 +++++++++++++++++++++++++++++++++++++++++++
 extra-x86_64/hdf5_18.patch |   14 +++++++
 4 files changed, 182 insertions(+)

Copied: python-pytables/repos/extra-i686/PKGBUILD (from rev 176212, python-pytables/trunk/PKGBUILD)
===================================================================
--- extra-i686/PKGBUILD	                        (rev 0)
+++ extra-i686/PKGBUILD	2016-05-24 11:50:32 UTC (rev 176213)
@@ -0,0 +1,77 @@
+# $Id$
+# Maintainer: Andrzej Giniewicz <gginiu at gmail.com>
+# Contributor: Sebastien Binet <binet at cern.ch>
+
+pkgbase=python-pytables
+pkgname=('python2-pytables' 'python-pytables')
+pkgver=3.2.2
+pkgrel=6
+arch=("i686" "x86_64")
+pkgdesc="A package for managing hierarchical datasets and designed to efficiently and easily cope with extremely large amounts of data"
+url="http://www.pytables.org"
+license=("BSD")
+makedepends=('lzo' 'hdf5_18' 'python2-numexpr' 'python-numexpr' 'python-setuptools' 'python2-setuptools')
+source=("http://pypi.python.org/packages/source/t/tables/tables-$pkgver.tar.gz"
+        "hdf5_18.patch")
+md5sums=('4a9792bba1a21f0853e7841d7c1beed8'
+         '6cca19b6ce2eb9f84d18888ad2c1a3b4')
+prepare() {
+  cd "$srcdir"/tables-$pkgver
+
+  # -march=native generates AVX instructions if the host supports it, which
+  # then results in "SIGILL (Illegal instruction)" on machines lacking AVX
+  # https://github.com/PyTables/PyTables/issues/458
+  # https://github.com/PyTables/PyTables/pull/503
+  sed -i 's/"-march=native",\?//' setup.py
+
+  # force hdf5_18 location
+  patch -Np0 -i "$srcdir"/hdf5_18.patch
+  
+  cd "${srcdir}" 
+  cp -a tables-$pkgver tables-py2-$pkgver
+}
+
+build() {
+  msg "Building Python2"
+  cd "$srcdir"/tables-py2-$pkgver
+  HDF5_DIR=/usr/include/hdf5_18 LD_LIBRARY_PATH=/usr/lib/hdf5_18  python2 setup.py build 
+
+  msg "Building Python3"
+  cd "$srcdir"/tables-$pkgver
+  python setup.py build
+}
+
+package_python2-pytables() {
+  depends=('lzo' 'hdf5' 'python2-numexpr')
+
+  cd "$srcdir"/tables-py2-${pkgver}
+  python2 setup.py install --prefix=/usr --root="$pkgdir" --optimize=1
+
+  install -Dm644 LICENSE.txt "$pkgdir/usr/share/licenses/$pkgname/LICENSE"
+
+  # see FS#36015 and FS#44971
+  mv "$pkgdir"/usr/bin/pt2to3{,-2.7}
+  mv "$pkgdir"/usr/bin/ptdump{,-2.7}
+  mv "$pkgdir"/usr/bin/ptrepack{,-2.7}
+  mv "$pkgdir"/usr/bin/pttree{,-2.7}
+
+  # see FS#45975
+  _site_packages=`python2 -c "from distutils.sysconfig import get_python_lib; print(get_python_lib())"`
+  chmod a+rx "${pkgdir}${_site_packages}"/*.egg-info
+  chmod a+r "${pkgdir}${_site_packages}"/*.egg-info/*
+}
+
+package_python-pytables() {
+  depends=('lzo' 'hdf5' 'python-numexpr')
+
+  cd "$srcdir"/tables-${pkgver}
+  python setup.py install --prefix=/usr --root="$pkgdir" --optimize=1
+
+  install -Dm644 LICENSE.txt "$pkgdir/usr/share/licenses/$pkgname/LICENSE"
+
+  # see FS#45975
+  _site_packages=`python -c "from distutils.sysconfig import get_python_lib; print(get_python_lib())"`
+  chmod a+rx "${pkgdir}${_site_packages}"/*.egg-info
+  chmod a+r "${pkgdir}${_site_packages}"/*.egg-info/*
+}
+

Copied: python-pytables/repos/extra-i686/hdf5_18.patch (from rev 176212, python-pytables/trunk/hdf5_18.patch)
===================================================================
--- extra-i686/hdf5_18.patch	                        (rev 0)
+++ extra-i686/hdf5_18.patch	2016-05-24 11:50:32 UTC (rev 176213)
@@ -0,0 +1,14 @@
+--- setup.py.old	2016-05-24 13:16:36.129769271 +0200
++++ setup.py	2016-05-24 13:17:07.380243229 +0200
+@@ -552,6 +552,11 @@
+         libdir = compiler.has_function(package.target_function,
+                                        libraries=(package.library_name,))
+ 
++    # force location of hdf5_18
++    if package==hdf5_package:
++        hdrdir = '/usr/include/hdf5_18'
++        libdir = '/usr/lib/hdf5_18'    
++
+     if not (hdrdir and libdir):
+         if package.tag in ['HDF5']:  # these are compulsory!
+             pname, ptag = package.name, package.tag

Copied: python-pytables/repos/extra-x86_64/PKGBUILD (from rev 176212, python-pytables/trunk/PKGBUILD)
===================================================================
--- extra-x86_64/PKGBUILD	                        (rev 0)
+++ extra-x86_64/PKGBUILD	2016-05-24 11:50:32 UTC (rev 176213)
@@ -0,0 +1,77 @@
+# $Id$
+# Maintainer: Andrzej Giniewicz <gginiu at gmail.com>
+# Contributor: Sebastien Binet <binet at cern.ch>
+
+pkgbase=python-pytables
+pkgname=('python2-pytables' 'python-pytables')
+pkgver=3.2.2
+pkgrel=6
+arch=("i686" "x86_64")
+pkgdesc="A package for managing hierarchical datasets and designed to efficiently and easily cope with extremely large amounts of data"
+url="http://www.pytables.org"
+license=("BSD")
+makedepends=('lzo' 'hdf5_18' 'python2-numexpr' 'python-numexpr' 'python-setuptools' 'python2-setuptools')
+source=("http://pypi.python.org/packages/source/t/tables/tables-$pkgver.tar.gz"
+        "hdf5_18.patch")
+md5sums=('4a9792bba1a21f0853e7841d7c1beed8'
+         '6cca19b6ce2eb9f84d18888ad2c1a3b4')
+prepare() {
+  cd "$srcdir"/tables-$pkgver
+
+  # -march=native generates AVX instructions if the host supports it, which
+  # then results in "SIGILL (Illegal instruction)" on machines lacking AVX
+  # https://github.com/PyTables/PyTables/issues/458
+  # https://github.com/PyTables/PyTables/pull/503
+  sed -i 's/"-march=native",\?//' setup.py
+
+  # force hdf5_18 location
+  patch -Np0 -i "$srcdir"/hdf5_18.patch
+  
+  cd "${srcdir}" 
+  cp -a tables-$pkgver tables-py2-$pkgver
+}
+
+build() {
+  msg "Building Python2"
+  cd "$srcdir"/tables-py2-$pkgver
+  HDF5_DIR=/usr/include/hdf5_18 LD_LIBRARY_PATH=/usr/lib/hdf5_18  python2 setup.py build 
+
+  msg "Building Python3"
+  cd "$srcdir"/tables-$pkgver
+  python setup.py build
+}
+
+package_python2-pytables() {
+  depends=('lzo' 'hdf5' 'python2-numexpr')
+
+  cd "$srcdir"/tables-py2-${pkgver}
+  python2 setup.py install --prefix=/usr --root="$pkgdir" --optimize=1
+
+  install -Dm644 LICENSE.txt "$pkgdir/usr/share/licenses/$pkgname/LICENSE"
+
+  # see FS#36015 and FS#44971
+  mv "$pkgdir"/usr/bin/pt2to3{,-2.7}
+  mv "$pkgdir"/usr/bin/ptdump{,-2.7}
+  mv "$pkgdir"/usr/bin/ptrepack{,-2.7}
+  mv "$pkgdir"/usr/bin/pttree{,-2.7}
+
+  # see FS#45975
+  _site_packages=`python2 -c "from distutils.sysconfig import get_python_lib; print(get_python_lib())"`
+  chmod a+rx "${pkgdir}${_site_packages}"/*.egg-info
+  chmod a+r "${pkgdir}${_site_packages}"/*.egg-info/*
+}
+
+package_python-pytables() {
+  depends=('lzo' 'hdf5' 'python-numexpr')
+
+  cd "$srcdir"/tables-${pkgver}
+  python setup.py install --prefix=/usr --root="$pkgdir" --optimize=1
+
+  install -Dm644 LICENSE.txt "$pkgdir/usr/share/licenses/$pkgname/LICENSE"
+
+  # see FS#45975
+  _site_packages=`python -c "from distutils.sysconfig import get_python_lib; print(get_python_lib())"`
+  chmod a+rx "${pkgdir}${_site_packages}"/*.egg-info
+  chmod a+r "${pkgdir}${_site_packages}"/*.egg-info/*
+}
+

Copied: python-pytables/repos/extra-x86_64/hdf5_18.patch (from rev 176212, python-pytables/trunk/hdf5_18.patch)
===================================================================
--- extra-x86_64/hdf5_18.patch	                        (rev 0)
+++ extra-x86_64/hdf5_18.patch	2016-05-24 11:50:32 UTC (rev 176213)
@@ -0,0 +1,14 @@
+--- setup.py.old	2016-05-24 13:16:36.129769271 +0200
++++ setup.py	2016-05-24 13:17:07.380243229 +0200
+@@ -552,6 +552,11 @@
+         libdir = compiler.has_function(package.target_function,
+                                        libraries=(package.library_name,))
+ 
++    # force location of hdf5_18
++    if package==hdf5_package:
++        hdrdir = '/usr/include/hdf5_18'
++        libdir = '/usr/lib/hdf5_18'    
++
+     if not (hdrdir and libdir):
+         if package.tag in ['HDF5']:  # these are compulsory!
+             pname, ptag = package.name, package.tag



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