[arch-commits] Commit in sagemath/trunk (PKGBUILD sagemath-pynac-0.7.12.patch)

Antonio Rojas arojas at archlinux.org
Sun Oct 1 16:45:08 UTC 2017


    Date: Sunday, October 1, 2017 @ 16:45:07
  Author: arojas
Revision: 261180

pynac 0.7.12 rebuild

Added:
  sagemath/trunk/sagemath-pynac-0.7.12.patch
Modified:
  sagemath/trunk/PKGBUILD

-----------------------------+
 PKGBUILD                    |    7 
 sagemath-pynac-0.7.12.patch |  390 ++++++++++++++++++++++++++++++++++++++++++
 2 files changed, 395 insertions(+), 2 deletions(-)

Modified: PKGBUILD
===================================================================
--- PKGBUILD	2017-10-01 16:44:57 UTC (rev 261179)
+++ PKGBUILD	2017-10-01 16:45:07 UTC (rev 261180)
@@ -9,7 +9,7 @@
 pkgbase=sagemath
 pkgname=(sagemath sagemath-jupyter)
 pkgver=8.0
-pkgrel=5
+pkgrel=6
 pkgdesc="Open Source Mathematics Software, free alternative to Magma, Maple, Mathematica, and Matlab"
 arch=(i686 x86_64)
 url="http://www.sagemath.org"
@@ -37,7 +37,7 @@
 source=("$pkgname-$pkgver.tar.gz::https://github.com/sagemath/sage/archive/$pkgver.tar.gz"
         env.patch package.patch latte-count.patch jupyter-path.patch sagemath-python3-notebook.patch test-optional.patch
         r-no-readline.patch fes02.patch sagemath-ecl-no-sigfpe.patch sagemath-cython-0.26.patch
-        sagemath-pynac-0.7.11.patch sagemath-detect-igraph.patch sagemath-networkx2.patch)
+        sagemath-pynac-0.7.11.patch sagemath-pynac-0.7.12.patch sagemath-detect-igraph.patch sagemath-networkx2.patch)
 sha256sums=('91df3e303add71616e24b38c04789f66d57ada7b1017e5369e850c42d5e8753d'
             'e0b5b8673300857fde823209a7e90faecf9e754ab812cc5e54297eddc0c79571'
             '4a2297e4d9d28f0b3a1f58e1b463e332affcb109eafde44837b1657e309c8212'
@@ -50,6 +50,7 @@
             'c31809f887bf9acc45c5bd9dd30bb93e73601d3efbf3016594c3c1d241731c8a'
             '2953ef15d957a2f3304a5584c154bf4777bcb4b461414d3a2178423257539755'
             '3e23ff449a5a3a032684287722455633762636b93ecfc35fb00e875c69eff240'
+            '719bb39c9c2cd1c6e75be0969000ba5ffcd2875bb5190fce6bb6a6feaa76b96f'
             '90be1d1a90120bd5bd3620769480106ba809dd23e896bc4a3f8931e5340f3cda'
             'a1a0ab5b794136b518f5f66fe9f1689411fabb3b81560b159eae81f6f69000e3')
 
@@ -88,6 +89,8 @@
   patch -p1 -i ../sagemath-cython-0.26.patch
 # fix build with pynac 0.7.11 https://trac.sagemath.org/ticket/23820
   patch -p1 -i ../sagemath-pynac-0.7.11.patch
+# fix build with pynac 0.7.12 https://trac.sagemath.org/ticket/23950
+  patch -p1 -i ../sagemath-pynac-0.7.12.patch
 
 # use python2
   sed -e 's|#!/usr/bin/env python|#!/usr/bin/env python2|' -e 's|exec python|exec python2|' -i src/bin/*

Added: sagemath-pynac-0.7.12.patch
===================================================================
--- sagemath-pynac-0.7.12.patch	                        (rev 0)
+++ sagemath-pynac-0.7.12.patch	2017-10-01 16:45:07 UTC (rev 261180)
@@ -0,0 +1,390 @@
+diff --git a/src/doc/de/thematische_anleitungen/sage_gymnasium.rst b/src/doc/de/thematische_anleitungen/sage_gymnasium.rst
+index 5a150a0..f9ede06 100644
+--- a/src/doc/de/thematische_anleitungen/sage_gymnasium.rst
++++ b/src/doc/de/thematische_anleitungen/sage_gymnasium.rst
+@@ -716,7 +716,7 @@ die ähnliche Funktion ``canonicalize_radical``::
+ Diese Gesetze können auch umgekehrt verwendet werden, wie in diesem Beispiel::
+ 
+     sage: (5*log(2) + 5*log(5)).simplify_log()
+-    log(100000)
++    5*log(10)
+ 
+ Es geben weitere mögliche Vereinfachungen, die wir hier nicht weiter erwähnen.
+ 
+diff --git a/src/sage/coding/code_bounds.py b/src/sage/coding/code_bounds.py
+index 7935bbf..64ac455 100644
+--- a/src/sage/coding/code_bounds.py
++++ b/src/sage/coding/code_bounds.py
+@@ -577,8 +577,8 @@ def entropy(x, q=2):
+ 
+         sage: codes.bounds.entropy(0, 2)
+         0
+-        sage: codes.bounds.entropy(1/5,4)
+-        1/5*log(3)/log(4) - 4/5*log(4/5)/log(4) - 1/5*log(1/5)/log(4)
++        sage: codes.bounds.entropy(1/5,4).factor()
++        1/10*(log(3) - 4*log(4/5) - log(1/5))/log(2)
+         sage: codes.bounds.entropy(1, 3)
+         log(2)/log(3)
+ 
+diff --git a/src/sage/functions/log.py b/src/sage/functions/log.py
+index 15e3dbf..64d898c 100644
+--- a/src/sage/functions/log.py
++++ b/src/sage/functions/log.py
+@@ -121,12 +121,12 @@ class Function_exp(GinacFunction):
+             sage: model_exp = exp(II)**a*(b)
+             sage: sol1_l={b: 5.0, a: 1.1}
+             sage: model_exp.subs(sol1_l)
+-            5.00000000000000*(e^II)^1.10000000000000
++            5.00000000000000*e^(1.10000000000000*II)
+ 
+         ::
+ 
+             sage: exp(3)^II*exp(x)
+-            (e^3)^II*e^x
++            e^(3*II + x)
+             sage: exp(x)*exp(x)
+             e^(2*x)
+             sage: exp(x)*exp(a)
+@@ -137,7 +137,7 @@ class Function_exp(GinacFunction):
+         Another instance of the same problem (:trac:`7394`)::
+ 
+             sage: 2*sqrt(e)
+-            2*sqrt(e)
++            2*e^(1/2)
+ 
+         Check that :trac:`19918` is fixed::
+ 
+@@ -271,7 +271,7 @@ class Function_log(GinacFunction):
+             sage: RDF(log(1024, 2))
+             10.0
+             sage: log(10, 4)
+-            log(10)/log(4)
++            1/2*log(10)/log(2)
+             sage: RDF(log(10, 4))
+             1.6609640474436813
+             sage: log(10, 2)
+diff --git a/src/sage/functions/orthogonal_polys.py b/src/sage/functions/orthogonal_polys.py
+index 5db9871..c877454 100644
+--- a/src/sage/functions/orthogonal_polys.py
++++ b/src/sage/functions/orthogonal_polys.py
+@@ -1666,7 +1666,7 @@ class Func_assoc_legendre_Q(BuiltinFunction):
+         EXAMPLES::
+ 
+             sage: gen_legendre_Q(2,1,3)
+-            -1/4*sqrt(-2)*(-36*I*pi + 36*log(4) - 36*log(2) - 25)
++            -1/4*sqrt(-2)*(-36*I*pi + 36*log(2) - 25)
+         """
+         ret = self._eval_special_values_(n, m, x)
+         if ret is not None:
+diff --git a/src/sage/libs/pynac/pynac.pxd b/src/sage/libs/pynac/pynac.pxd
+index 9e37f08..1d19fdd 100644
+--- a/src/sage/libs/pynac/pynac.pxd
++++ b/src/sage/libs/pynac/pynac.pxd
+@@ -97,6 +97,7 @@ cdef extern from "sage/libs/pynac/wrap.h":
+ 
+     cdef cppclass GEx "ex":
+         GEx()
++        GEx(GNumeric o)
+         GEx(GSymbol m)
+         GEx(GEx m)
+         GEx(long n)
+@@ -127,8 +128,8 @@ cdef extern from "sage/libs/pynac/wrap.h":
+         GEx numer()                   except +
+         GEx denom()                   except +
+         GEx numer_denom()             except +
+-        int degree(GEx expr)          except +
+-        int ldegree(GEx expr)         except +
++        GNumeric degree(GEx expr)          except +
++        GNumeric ldegree(GEx expr)         except +
+         GEx unit(GEx expr)            except +
+         GEx content(GEx expr)         except +
+         GEx primpart(GEx expr)        except +
+@@ -161,6 +162,7 @@ cdef extern from "sage/libs/pynac/wrap.h":
+ 
+     # Algorithms
+     GEx g_gcd "gcd"(GEx a, GEx b) except +
++    bint g_factor "factor"(GEx expr, GEx res) except +
+     GEx g_gosper_term "gosper_term"(GEx the_ex, GEx n) except +
+     GEx g_gosper_sum_definite "gosper_sum_definite"(GEx the_ex,
+             GEx n, GEx a, GEx b, int* p) except +
+diff --git a/src/sage/rings/asymptotic/asymptotic_ring.py b/src/sage/rings/asymptotic/asymptotic_ring.py
+index 0b03a4a..9de56a6 100644
+--- a/src/sage/rings/asymptotic/asymptotic_ring.py
++++ b/src/sage/rings/asymptotic/asymptotic_ring.py
+@@ -2485,7 +2485,7 @@ class AsymptoticExpansion(CommutativeAlgebraElement):
+         ::
+ 
+             sage: (x^2 + log(x)).subs(x=4*x+2).truncate(5)
+-            16*x^2 + 16*x + log(x) + log(4) + 4 + 1/2*x^(-1) + O(x^(-2))
++            16*x^2 + 16*x + log(x) + 2*log(2) + 4 + 1/2*x^(-1) + O(x^(-2))
+             sage: _.parent()
+             Asymptotic Ring <(e^x)^QQ * x^ZZ * log(x)^ZZ> over Symbolic Ring
+ 
+diff --git a/src/sage/rings/asymptotic/asymptotics_multivariate_generating_functions.py 
+b/src/sage/rings/asymptotic/asymptotics_multivariate_generating_functions.py
+index 9a6f67a..de61ed3 100644
+--- a/src/sage/rings/asymptotic/asymptotics_multivariate_generating_functions.py
++++ b/src/sage/rings/asymptotic/asymptotics_multivariate_generating_functions.py
+@@ -60,9 +60,15 @@ A univariate smooth point example::
+     sage: decomp = F.asymptotic_decomposition(alpha)
+     sage: decomp
+     (0, []) +
+-    (-1/2*(x^2 + 6*x + 9)*r^2/(x^5 + 9*x^4 + 27*x^3 + 27*x^2)
+-     - 1/2*(5*x^2 + 24*x + 27)*r/(x^5 + 9*x^4 + 27*x^3 + 27*x^2)
+-     - 3*(x^2 + 3*x + 3)/(x^5 + 9*x^4 + 27*x^3 + 27*x^2),
++    (-1/2*r^2*(x^2/(x^5 + 9*x^4 + 27*x^3 + 27*x^2)
++     + 6*x/(x^5 + 9*x^4 + 27*x^3 + 27*x^2)
++     + 9/(x^5 + 9*x^4 + 27*x^3 + 27*x^2))
++     - 1/2*r*(5*x^2/(x^5 + 9*x^4 + 27*x^3 + 27*x^2)
++     + 24*x/(x^5 + 9*x^4 + 27*x^3 + 27*x^2)
++     + 27/(x^5 + 9*x^4 + 27*x^3 + 27*x^2))
++     - 3*x^2/(x^5 + 9*x^4 + 27*x^3 + 27*x^2)
++     - 9*x/(x^5 + 9*x^4 + 27*x^3 + 27*x^2)
++     - 9/(x^5 + 9*x^4 + 27*x^3 + 27*x^2),
+      [(x - 1/2, 1)])
+     sage: F1 = decomp[1]
+     sage: p = {x: 1/2}
+@@ -139,9 +145,9 @@ A multiple point example (Example 6.5 of [RaWi2012]_)::
+     sage: alpha = (var('a'), var('b'))
+     sage: decomp =  F.asymptotic_decomposition(alpha); decomp
+     (0, []) +
+-    (-1/9*(2*b^2*x^2 - 5*a*b*x*y + 2*a^2*y^2)*r^2/(x^2*y^2)
+-      - 1/9*(6*b*x^2 - 5*(a + b)*x*y + 6*a*y^2)*r/(x^2*y^2)
+-      - 1/9*(4*x^2 - 5*x*y + 4*y^2)/(x^2*y^2),
++    (-1/9*r^2*(2*a^2/x^2 + 2*b^2/y^2 - 5*a*b/(x*y))
++     - 1/9*r*(6*a/x^2 + 6*b/y^2 - 5*a/(x*y) - 5*b/(x*y))
++     - 4/9/x^2 - 4/9/y^2 + 5/9/(x*y),
+      [(x + 2*y - 1, 1), (2*x + y - 1, 1)])
+     sage: F1 = decomp[1]
+     sage: F1.asymptotics(p, alpha, 2)
+@@ -1480,9 +1486,9 @@ class FractionWithFactoredDenominator(RingElement):
+             sage: alpha = [var('a')]
+             sage: F.asymptotic_decomposition(alpha)
+             (0, []) +
+-            (1/54*(5*a^2*x^2 + 2*a^2*x + 11*a^2)*r^2/x^2
+-             - 1/54*(5*a*x^2 - 2*a*x - 33*a)*r/x^2 + 11/27/x^2, [(x - 1, 1)]) +
+-            (-5/27, [(x + 2, 1)])
++            (1/54*(5*a^2 + 2*a^2/x + 11*a^2/x^2)*r^2
++             - 1/54*(5*a - 2*a/x - 33*a/x^2)*r + 11/27/x^2,
++            [(x - 1, 1)]) + (-5/27, [(x + 2, 1)])
+ 
+         ::
+ 
+@@ -1495,7 +1501,7 @@ class FractionWithFactoredDenominator(RingElement):
+             sage: alpha = var('a, b')
+             sage: F.asymptotic_decomposition(alpha)
+             (0, []) +
+-            (1/3*(2*b*x - a*y)*r/(x*y) + 1/3*(2*x - y)/(x*y),
++            (-1/3*r*(a/x - 2*b/y) - 1/3/x + 2/3/y,
+              [(x + 2*y - 1, 1), (2*x + y - 1, 1)])
+         """
+         R = self.denominator_ring
+@@ -1600,7 +1606,7 @@ class FractionWithFactoredDenominator(RingElement):
+             (1, [(x*y + x + y - 1, 2)])
+             sage: alpha = [4, 3]
+             sage: decomp = F.asymptotic_decomposition(alpha); decomp
+-            (0, []) + (-3/2*r*(y + 1)/y - 1/2*(y + 1)/y, [(x*y + x + y - 1, 1)])
++            (0, []) + (-3/2*r*(1/y + 1) - 1/2/y - 1/2, [(x*y + x + y - 1, 1)])
+             sage: F1 = decomp[1]
+             sage: p = {y: 1/3, x: 1/2}
+             sage: asy = F1.asymptotics(p, alpha, 2, verbose=True)
+@@ -1634,7 +1640,7 @@ class FractionWithFactoredDenominator(RingElement):
+             sage: alpha = [3, 3, 2]
+             sage: decomp = F.asymptotic_decomposition(alpha); decomp
+             (0, []) +
+-            (16*r*(4*y - 3*z)/(y*z) + 16*(2*y - z)/(y*z),
++            (-16*r*(3/y - 4/z) - 16/y + 32/z,
+              [(x + 2*y + z - 4, 1), (2*x + y + z - 4, 1)])
+             sage: F1 = decomp[1]
+             sage: p = {x: 1, y: 1, z: 1}
+diff --git a/src/sage/rings/asymptotic/term_monoid.py b/src/sage/rings/asymptotic/term_monoid.py
+index b879639..ded7f02 100644
+--- a/src/sage/rings/asymptotic/term_monoid.py
++++ b/src/sage/rings/asymptotic/term_monoid.py
+@@ -3339,7 +3339,7 @@ class ExactTerm(TermWithCoefficient):
+             sage: T(x^1234).log_term()
+             (1234*log(x),)
+             sage: T(49*x^7).log_term(base=7)
+-            (log(49)/log(7), 7/log(7)*log(x))
++            (2, 7/log(7)*log(x))
+ 
+         ::
+ 
+@@ -3347,7 +3347,7 @@ class ExactTerm(TermWithCoefficient):
+             sage: T('x * y').log_term()
+             (log(x), log(y))
+             sage: T('4 * x * y').log_term(base=2)
+-            (log(4)/log(2), 1/log(2)*log(x), 1/log(2)*log(y))
++            (2, 1/log(2)*log(x), 1/log(2)*log(y))
+ 
+         .. SEEALSO::
+ 
+diff --git a/src/sage/rings/integer.pyx b/src/sage/rings/integer.pyx
+index 0b8a3bd..cdc34a2 100644
+--- a/src/sage/rings/integer.pyx
++++ b/src/sage/rings/integer.pyx
+@@ -2532,7 +2532,7 @@ cdef class Integer(sage.structure.element.EuclideanDomainElement):
+             sage: Integer(125).log(5,prec=53)
+             3.00000000000000
+             sage: log(Integer(125))
+-            log(125)
++            3*log(5)
+ 
+         For extremely large numbers, this works::
+ 
+diff --git a/src/sage/rings/rational.pyx b/src/sage/rings/rational.pyx
+index 36af3a5..857081b 100644
+--- a/src/sage/rings/rational.pyx
++++ b/src/sage/rings/rational.pyx
+@@ -3075,11 +3075,11 @@ cdef class Rational(sage.structure.element.FieldElement):
+             sage: (124/345).log(5,100)
+             -0.63578895682825611710391773754
+             sage: log(QQ(125))
+-            log(125)
++            3*log(5)
+             sage: log(QQ(125), 5)
+             3
+             sage: log(QQ(125), 3)
+-            log(125)/log(3)
++            3*log(5)/log(3)
+             sage: QQ(8).log(1/2)
+             -3
+             sage: (1/8).log(1/2)
+diff --git a/src/sage/schemes/elliptic_curves/ell_point.py b/src/sage/schemes/elliptic_curves/ell_point.py
+index 8009421..9ec892e 100644
+--- a/src/sage/schemes/elliptic_curves/ell_point.py
++++ b/src/sage/schemes/elliptic_curves/ell_point.py
+@@ -2886,7 +2886,7 @@ class EllipticCurvePoint_number_field(EllipticCurvePoint_field):
+             sage: Q.non_archimedean_local_height(K.ideal(1-2*i))
+             0
+             sage: Q.non_archimedean_local_height()
+-            1/2*log(16)
++            2*log(2)
+ 
+         An example over the rational numbers::
+ 
+diff --git a/src/sage/symbolic/constants_c.pyx b/src/sage/symbolic/constants_c.pyx
+index 8eb61f5..38e8db6 100644
+--- a/src/sage/symbolic/constants_c.pyx
++++ b/src/sage/symbolic/constants_c.pyx
+@@ -145,14 +145,14 @@ cdef class E(Expression):
+             sage: t.operands()
+             [a]
+ 
+-        As opposed to::
++        This applies to the unit argument as well::
+ 
+             sage: u = SR(1).exp()^a; u
+             e^a
+             sage: u.operator()
+-            <built-in function pow>
++            exp
+             sage: u.operands()
+-            [e, a]
++            [a]
+ 
+         It also works with matrices (see :trac:`4735`)::
+ 
+diff --git a/src/sage/symbolic/expression.pyx b/src/sage/symbolic/expression.pyx
+index 94252ea..3e06201 100644
+--- a/src/sage/symbolic/expression.pyx
++++ b/src/sage/symbolic/expression.pyx
+@@ -3247,11 +3247,8 @@ cdef class Expression(CommutativeRingElement):
+             -1
+             sage: b = -x*A; c = b*b; c
+             1/4*x^2*(sqrt(5) + I*sqrt(2*sqrt(5) + 10) - 1)
+-
+-        Products of non integer powers of exp are not simplified::
+-
+             sage: exp(x)^I*exp(z)^(2.5)
+-            (e^x)^I*(e^z)^2.50000000000000
++            e^(I*x + 2.50000000000000*z)
+ 
+         ::
+ 
+@@ -3925,7 +3922,7 @@ cdef class Expression(CommutativeRingElement):
+             sage: 0^1.0
+             0.000000000000000
+             sage: exp(x)^1.0
+-            (e^x)^1.00000000000000
++            e^(1.00000000000000*x)
+         """
+         cdef Expression base, nexp
+ 
+@@ -6311,7 +6308,7 @@ cdef class Expression(CommutativeRingElement):
+             0
+         """
+         cdef Expression ss = self.coerce_in(s)
+-        return self._gobj.ldegree(ss._gobj)
++        return new_Expression_from_GEx(self._parent, GEx(self._gobj.ldegree(ss._gobj)))
+ 
+     def degree(self, s):
+         """
+@@ -6337,7 +6334,7 @@ cdef class Expression(CommutativeRingElement):
+             0
+         """
+         cdef Expression ss = self.coerce_in(s)
+-        return self._gobj.degree(ss._gobj)
++        return new_Expression_from_GEx(self._parent, GEx(self._gobj.degree(ss._gobj)))
+ 
+     def unit(self, s):
+         """
+@@ -7185,12 +7182,12 @@ cdef class Expression(CommutativeRingElement):
+             sage: f.collect(z)
+             (x^2*y^2 + 4)*z^2 + 4*x*y + 20*y^2 + (x + 21*y)*z
+ 
+-        Sometimes, we do have to call :meth:`expand()` on the
+-        expression first to achieve the desired result::
++        The terms are collected, whether the expression
++        is expanded or not::
+ 
+             sage: f = (x + y)*(x - z)
+             sage: f.collect(x)
+-            x^2 + x*y - x*z - y*z
++            x^2 + x*(y - z) - y*z
+             sage: f.expand().collect(x)
+             x^2 + x*(y - z) - y*z
+ 
+@@ -10433,9 +10430,9 @@ cdef class Expression(CommutativeRingElement):
+         ``x*log(9)`` is contracted only if ``algorithm`` is ``'all'``::
+ 
+             sage: (x*log(9)).simplify_log()
+-            x*log(9)
++            2*x*log(3)
+             sage: (x*log(9)).simplify_log('all')
+-            log(9^x)
++            log(3^(2*x))
+ 
+         TESTS:
+ 
+@@ -10550,7 +10547,7 @@ cdef class Expression(CommutativeRingElement):
+         To expand also log(3/4) use ``algorithm='all'``::
+ 
+             sage: (log(3/4*x^pi)).log_expand('all')
+-            pi*log(x) - log(4) + log(3)
++            pi*log(x) + log(3) - 2*log(2)
+ 
+         To expand only the power use ``algorithm='powers'``.::
+ 
+@@ -10573,7 +10570,7 @@ cdef class Expression(CommutativeRingElement):
+             pi*log(x) + log(3/4)
+ 
+             sage: (log(3/4*x^pi)).log_expand('all')
+-            pi*log(x) - log(4) + log(3)
++            pi*log(x) + log(3) - 2*log(2)
+ 
+             sage: (log(3/4*x^pi)).log_expand()
+             pi*log(x) + log(3/4)
+diff --git a/src/sage/tests/french_book/calculus_doctest.py b/src/sage/tests/french_book/calculus_doctest.py
+index 0d40cae..ffe5d4b 100644
+--- a/src/sage/tests/french_book/calculus_doctest.py
++++ b/src/sage/tests/french_book/calculus_doctest.py
+@@ -331,7 +331,7 @@ Sage example in ./calculus.tex, line 914::
+ Sage example in ./calculus.tex, line 929::
+ 
+     sage: v(x) = diff(u(x), x); sol = solve(v(x) == 0, x); sol
+-    [x == 100/log(100), x == 0]
++    [x == 50/log(10), x == 0]
+     sage: floor(sol[0].rhs())
+     21
+ 



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