[arch-commits] Commit in python-netcdf4-openmpi/repos (3 files)

[Eli Schwartz]

    Date: Thursday, July 26, 2018 @ 09:14:39
  Author: eschwartz
Revision: 363494

archrelease: copy trunk to community-staging-x86_64

Added:
  python-netcdf4-openmpi/repos/community-staging-x86_64/
  python-netcdf4-openmpi/repos/community-staging-x86_64/802.patch
    (from rev 363493, python-netcdf4-openmpi/trunk/802.patch)
  python-netcdf4-openmpi/repos/community-staging-x86_64/PKGBUILD
    (from rev 363493, python-netcdf4-openmpi/trunk/PKGBUILD)

-----------+
 802.patch |   22 ++++++++++++++++++++
 PKGBUILD  |   63 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
 2 files changed, 85 insertions(+)

Copied: python-netcdf4-openmpi/repos/community-staging-x86_64/802.patch (from rev 363493, python-netcdf4-openmpi/trunk/802.patch)
===================================================================
--- community-staging-x86_64/802.patch	                        (rev 0)
+++ community-staging-x86_64/802.patch	2018-07-26 09:14:39 UTC (rev 363494)
@@ -0,0 +1,22 @@
+From 138600a5a7df32772db1a81fd2882886818c8076 Mon Sep 17 00:00:00 2001
+From: Jeff Whitaker <jswhit at fastmail.fm>
+Date: Thu, 24 May 2018 16:45:17 -0600
+Subject: [PATCH] fix for failing test
+
+---
+ test/tst_cdf5.py | 2 +-
+ 1 file changed, 1 insertion(+), 1 deletion(-)
+
+diff --git a/test/tst_cdf5.py b/test/tst_cdf5.py
+index 1b46c91a..175f9b53 100644
+--- a/test/tst_cdf5.py
++++ b/test/tst_cdf5.py
+@@ -4,7 +4,7 @@
+ from numpy.testing import assert_array_equal
+ 
+ FILE_NAME = tempfile.NamedTemporaryFile(suffix='.nc', delete=False).name
+-dimsize = np.iinfo(np.int64).max # max unsigned 64 bit integer
++dimsize = np.iinfo(np.int32).max*2 # only allowed in CDF5
+ ndim = 100
+ arrdata = np.random.randint(np.iinfo(np.uint8).min,np.iinfo(np.uint8).max,size=ndim)
+ 

Copied: python-netcdf4-openmpi/repos/community-staging-x86_64/PKGBUILD (from rev 363493, python-netcdf4-openmpi/trunk/PKGBUILD)
===================================================================
--- community-staging-x86_64/PKGBUILD	                        (rev 0)
+++ community-staging-x86_64/PKGBUILD	2018-07-26 09:14:39 UTC (rev 363494)
@@ -0,0 +1,63 @@
+# Maintainer: Bruno Pagani <archange at archlinux.org>
+
+_pkg=netCDF4
+_mpi=openmpi
+pkgbase=python-${_pkg,,}-${_mpi}
+pkgname=("python-${_pkg,,}-${_mpi}" "python2-${_pkg,,}-${_mpi}")
+pkgver=1.4.0
+pkgrel=3
+pkgdesc="Python/NumPy interface to the netCDF C library (${_mpi} version)"
+arch=('x86_64')
+url="https://unidata.github.io/${_pkg,,}-python"
+license=('MIT')
+makedepends=('cython' 'python-setuptools' 'cython2' 'python2-setuptools' 'python-numpy' 'python-cftime' 'python-mpi4py' 'python2-numpy' 'python2-cftime' 'python2-mpi4py' "netcdf-${_mpi}")
+source=("https://pypi.io/packages/source/n/${_pkg}/${_pkg}-${pkgver}.tar.gz"
+        '802.patch')
+sha256sums=('a6c0b46f410f101c09d60b8cc460aafec06732f0130c6cb2730717bcc605b388'
+            '17e3442e75d75fcba5fabe387f5dc5ef1cc2e7a4de25d96a2fcec699ce628289')
+
+prepare() {
+    cd ${_pkg}-${pkgver}
+    patch -p1 -i ../802.patch
+    cd ..
+    cp -a ${_pkg}-${pkgver}{,-py2}
+}
+
+build() {
+    cd ${_pkg}-${pkgver}
+    USE_NCCONFIG=1 python setup.py build
+
+    cd ../${_pkg}-${pkgver}-py2
+    USE_NCCONFIG=1 python2 setup.py build
+}
+
+check() {
+    cd ${_pkg}-${pkgver}/test
+    PYTHONPATH="../build/lib.linux-${CARCH}-3.7" python -B ./run_all.py
+
+    cd ../../${_pkg}-${pkgver}-py2/test
+    PYTHONPATH="../build/lib.linux-${CARCH}-2.7" python2 -B ./run_all.py
+}
+
+package_python-netcdf4-openmpi() {
+    depends=('python-numpy' 'python-cftime' 'python-mpi4py' "netcdf-${_mpi}")
+
+    cd ${_pkg}-${pkgver}
+    USE_NCCONFIG=1 python setup.py install --root="${pkgdir}" --skip-build --optimize=2
+
+    install -Dm644 docs/netCDF4/* -t "${pkgdir}"/usr/share/doc/${pkgname}/docs/netCDF4
+    install -Dm644 COPYING -t "${pkgdir}"/usr/share/licenses/${pkgname}
+}
+
+package_python2-netcdf4-openmpi() {
+    depends=('python2-numpy' 'python2-cftime' 'python2-mpi4py' "netcdf-${_mpi}")
+
+    cd ${_pkg}-${pkgver}-py2
+    USE_NCCONFIG=1 python2 setup.py install --root="${pkgdir}" --skip-build --optimize=2
+
+    for binary in "${pkgdir}"/usr/bin/* ;
+        do mv ${binary}{,-py2} ;
+    done
+    install -Dm644 docs/netCDF4/* -t "${pkgdir}"/usr/share/doc/${pkgname}/docs/netCDF4
+    install -Dm644 COPYING -t "${pkgdir}"/usr/share/licenses/${pkgname}
+}