[arch-commits] Commit in gap/repos (4 files)
Antonio Rojas
arojas at archlinux.org
Sat Apr 20 21:55:11 UTC 2019
Date: Saturday, April 20, 2019 @ 21:55:10
Author: arojas
Revision: 452458
archrelease: copy trunk to community-staging-x86_64
Added:
gap/repos/community-staging-x86_64/
gap/repos/community-staging-x86_64/PKGBUILD
(from rev 452457, gap/trunk/PKGBUILD)
gap/repos/community-staging-x86_64/gap-polymake-3.3.patch
(from rev 452457, gap/trunk/gap-polymake-3.3.patch)
gap/repos/community-staging-x86_64/gap.sh
(from rev 452457, gap/trunk/gap.sh)
------------------------+
PKGBUILD | 118 +++++++++++++++++++++++++++++++++++++++++++++++
gap-polymake-3.3.patch | 26 ++++++++++
gap.sh | 7 ++
3 files changed, 151 insertions(+)
Copied: gap/repos/community-staging-x86_64/PKGBUILD (from rev 452457, gap/trunk/PKGBUILD)
===================================================================
--- community-staging-x86_64/PKGBUILD (rev 0)
+++ community-staging-x86_64/PKGBUILD 2019-04-20 21:55:10 UTC (rev 452458)
@@ -0,0 +1,118 @@
+# Maintainer: Antonio Rojas <arojas at archlinux.org>
+# Contributor: TDY <tdy at archlinux.info>
+# Contributor: Rémy Oudompheng <oudomphe at clipper.ens.fr>
+
+pkgbase=gap
+pkgname=(gap gap-doc gap-packages)
+pkgver=4.10.1
+pkgrel=4
+pkgdesc="Groups, Algorithms, Programming: a system for computational discrete algebra"
+arch=(x86_64)
+url="https://www.gap-system.org/"
+license=(GPL)
+source=("https://www.gap-system.org/pub/gap/gap-${pkgver%.*}/tar.gz/gap-$pkgver.tar.gz" gap.sh
+ gap-polymake-3.3.patch)
+sha256sums=('b2d8800e338a6a9afdf92b06368c2e1a16b8adebffcd4c10319c1b3a4e827e45'
+ '143fb8a79a52c007903cce13407850df309ef803a9b00398d05169355917de46'
+ 'c92849b2643e0e21ffdcfa230fb23fe4a276ec15402f178d5d69ddb0e537fbbe')
+makedepends=(libxaw givaro mpfi normaliz boost c-xsc zeromq fplll polymake wget chrpath)
+
+prepare() {
+ cd gap-$pkgver
+
+# Use system normaliz
+ sed -e '/build-normaliz.sh/d' -i bin/BuildPackages.sh
+# Disable anupq package, it's i686 only
+ rm -r pkg/anupq-*
+# Fix https://bugs.archlinux.org/task/55174
+ sed -e '/xgap/d' -i pkg/sonata-*/PackageInfo.g
+ sed -e '/XGAP/d' -i pkg/cryst/PackageInfo.g
+
+ cd pkg/PolymakeInterface*
+ patch -p2 -i "$srcdir"/gap-polymake-3.3.patch # Fix build of PolymakeInterface with polymake 3.3
+}
+
+build() {
+ cd gap-$pkgver
+ ./configure --prefix=/usr --with-gmp=system
+
+ # https://bugzilla.gnome.org/show_bug.cgi?id=655517
+ sed -i -e 's/ -shared / -Wl,-O1,--as-needed\0/g' libtool
+
+ make
+ make libgap.la
+
+ # Install libgap so we can link packages against it
+ mkdir -p tmp-install
+ libtool --mode=install install libgap.la "$srcdir"/gap-$pkgver/tmp-install
+
+ cd pkg
+ export MAKEFLAGS='-j1' # Fix build of carat package
+ export CXXFLAGS+=" -I/usr/include/cxsc" # Find c-xsc headers
+ export LDFLAGS+=" -L$srcdir/gap-$pkgver/tmp-install -lgap" # See https://trac.sagemath.org/ticket/27372
+ export LD_LIBRARY_PATH="$srcdir"/gap-$pkgver/tmp-install
+ ../bin/BuildPackages.sh
+}
+
+_standardpkgs=(GAPDoc-* primgrp-* SmallGrp-* transgrp atlasrep autpgrp-* alnuth-* crisp-* ctbllib FactInt-* fga irredsol-* laguna-*
+ polenta-* polycyclic-* resclasses-* sophus-* tomlib-*)
+
+package_gap() {
+ depends=(gmp zlib)
+ optdepends=('gap-packages: extra packages' 'gap-doc: documentation')
+ conflicts=(libgap)
+ replaces=(gap-data libgap gap-4.8 gap-4.8-data)
+ cd gap-$pkgver
+
+ install -Dm644 src/*.h -t "$pkgdir"/usr/include/gap
+ install -Dm644 gen/config.h -t "$pkgdir"/usr/include/gap
+ install -Dm644 src/hpc/*.h -t "$pkgdir"/usr/include/gap/hpc
+
+ install -d "$pkgdir"/usr/lib
+ libtool --mode=install install libgap.la "$pkgdir"/usr/lib
+
+ mkdir -p "$pkgdir"/usr/{bin,lib/gap/pkg}
+ cp -r grp lib "$pkgdir"/usr/lib/gap
+ for _pkg in ${_standardpkgs[@]}; do
+ cp -r pkg/$_pkg "$pkgdir"/usr/lib/gap/pkg
+ done
+ install -Dm755 gap -t "$pkgdir"/usr/lib/gap
+# Install launcher script
+ install -Dm755 "$srcdir"/gap.sh "$pkgdir"/usr/bin/gap
+}
+
+package_gap-doc() {
+ depends=(gap)
+ replaces=(gap-4.8-doc)
+ pkgdesc="Documentation for GAP"
+ cd gap-$pkgver
+
+ mkdir -p "$pkgdir"/usr/lib/gap
+ cp -r doc "$pkgdir"/usr/lib/gap
+}
+
+package_gap-packages() {
+ depends=(gap)
+ replaces=(gap-4.8-packages)
+ optdepends=('normaliz: Normaliz interface package' 'libxaw: xgap package' 'c-xsc: float package' 'mpfi: float package'
+ 'libmpc: float package' 'fplll: float package' 'zeromq: ZeroMQ interface package'
+ 'polymake: Polymake interface package' 'curl: curl interface package')
+ pkgdesc="Extra packages for GAP"
+ cd gap-$pkgver
+
+ mkdir -p "$pkgdir"/usr/lib/gap
+ cp -r pkg "$pkgdir"/usr/lib/gap
+
+# provided by main gap package
+ for _pkg in ${_standardpkgs[@]}; do
+ rm -r "$pkgdir"/usr/lib/gap/pkg/$_pkg
+ done
+
+# fix RPATH
+ chrpath -r \$ORIGIN/../lib/ "$pkgdir"/usr/lib/gap/pkg/semigroups-*/bin/x86_64-*/semigroups.so
+ chrpath -d "$pkgdir"/usr/lib/gap/pkg/NormalizInterface-*/bin/x86_64-*/NormalizInterface.so
+
+# remove leftover binaries and source files
+ find "$pkgdir"/usr/lib/gap/pkg -name .libs -o -name '*.o' | xargs rm -fr
+ find "$pkgdir"/usr/lib/gap/pkg -type d -name src | xargs rm -fr
+}
Copied: gap/repos/community-staging-x86_64/gap-polymake-3.3.patch (from rev 452457, gap/trunk/gap-polymake-3.3.patch)
===================================================================
--- community-staging-x86_64/gap-polymake-3.3.patch (rev 0)
+++ community-staging-x86_64/gap-polymake-3.3.patch 2019-04-20 21:55:10 UTC (rev 452458)
@@ -0,0 +1,26 @@
+diff --git a/PolymakeInterface/src/polymake_fan.cpp b/PolymakeInterface/src/polymake_fan.cpp
+index e3914d7b..9e1b164b 100644
+--- a/PolymakeInterface/src/polymake_fan.cpp
++++ b/PolymakeInterface/src/polymake_fan.cpp
+@@ -93,7 +93,7 @@ Obj REAL_FAN_BY_RAYS_AND_CONES( Polymake_Data* data, Obj rays, Obj cones ){
+ return NULL;
+ }
+ #endif
+- incMatr[i] += INT_INTOBJ( numb ) - 1;
++ incMatr[i] += (pm::Set<int>)pm::scalar2set(INT_INTOBJ( numb ) - 1);
+ }
+ }
+
+diff --git a/PolymakeInterface/src/polymake_matroid.cpp b/PolymakeInterface/src/polymake_matroid.cpp
+index 4f33795b..5ea2e8d2 100644
+--- a/PolymakeInterface/src/polymake_matroid.cpp
++++ b/PolymakeInterface/src/polymake_matroid.cpp
+@@ -52,7 +52,7 @@ Obj REAL_CREATE_MATROID_ABSTRACT( Polymake_Data* data, Obj size, Obj elements ){
+ int current_length = LEN_PLIST( current_basis_list );
+
+ for( int i=1;i<=current_length;i++){
+- incMatr[current_basis] += INT_INTOBJ( ELM_PLIST( current_basis_list, i ) ) - 1;
++ incMatr[current_basis] += (pm::Set<int>)pm::scalar2set(INT_INTOBJ( ELM_PLIST( current_basis_list, i ) ) - 1);
+ }
+
+ }
Copied: gap/repos/community-staging-x86_64/gap.sh (from rev 452457, gap/trunk/gap.sh)
===================================================================
--- community-staging-x86_64/gap.sh (rev 0)
+++ community-staging-x86_64/gap.sh 2019-04-20 21:55:10 UTC (rev 452458)
@@ -0,0 +1,7 @@
+#!/bin/sh
+
+GAP_ROOT="/usr/lib/gap"
+GAP_DIR=$GAP_ROOT
+GAP_EXE=$GAP_ROOT
+
+exec "$GAP_EXE/gap" -l "$GAP_DIR" "$@"
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