[arch-commits] Commit in netcdf-openmpi/repos/community-x86_64 (PKGBUILD PKGBUILD)
Bruno Pagani
archange at gemini.archlinux.org
Mon Jun 27 15:39:37 UTC 2022
Date: Monday, June 27, 2022 @ 15:39:37
Author: archange
Revision: 1239703
archrelease: copy trunk to community-x86_64
Added:
netcdf-openmpi/repos/community-x86_64/PKGBUILD
(from rev 1239702, netcdf-openmpi/trunk/PKGBUILD)
Deleted:
netcdf-openmpi/repos/community-x86_64/PKGBUILD
----------+
PKGBUILD | 136 +++++++++++++++++++++++++++++++------------------------------
1 file changed, 71 insertions(+), 65 deletions(-)
Deleted: PKGBUILD
===================================================================
--- PKGBUILD 2022-06-27 15:39:29 UTC (rev 1239702)
+++ PKGBUILD 2022-06-27 15:39:37 UTC (rev 1239703)
@@ -1,65 +0,0 @@
-# Maintainer: Ronald van Haren <ronald.archlinux.org>
-# Maintainer: Bruno Pagani <archange at archlinux.org>
-# Contributor: damir <damir at archlinux.org>
-
-_pkg=netcdf
-_mpi=openmpi
-pkgname=${_pkg}-${_mpi}
-pkgver=4.9.0
-pkgrel=1
-pkgdesc="network Common Data Form interface for array-oriented data access and corresponding library with parallel support (${_mpi} version)"
-arch=(x86_64)
-url="https://www.unidata.ucar.edu/software/netcdf/"
-license=(custom)
-depends=("hdf5-${_mpi}" "pnetcdf-${_mpi}" curl libxml2)
-makedepends=(cmake)
-optdepends=('netcdf-fortran: fortran bindings' 'netcdf-cxx: c++ bindings')
-checkdepends=(inetutils unzip)
-provides=("${_pkg}")
-conflicts=("${_pkg}")
-options=(!makeflags)
-source=(https://github.com/Unidata/netcdf-c/archive/v${pkgver}/${pkgname}-${pkgver}.tar.gz
- netcdf-4.9.0-fix-cmake-typo.patch::https://github.com/Unidata/netcdf-c/commit/80a6611cfca98a5979c5ac69cba56a49af8c1e48.patch)
-sha256sums=('9f4cb864f3ab54adb75409984c6202323d2fc66c003e5308f3cdf224ed41c0a6'
- 'ed45ae6c49cf8dcddaadef4c5cf403049bf3f761187413d7b03754d319345d6a')
-
-prepare() {
- patch -p1 -d ${_pkg}-c-${pkgver} < netcdf-4.9.0-fix-cmake-typo.patch
- # https://github.com/Unidata/netcdf-c/issues/2242
- sed -i "/add_sh_test(ncdap tst_remote3)/d" ${_pkg}-c-${pkgver}/ncdap_test/CMakeLists.txt
-}
-
-build() {
- export CC=mpicc
- # Disabling remote tests because of https://github.com/Unidata/netcdf-c/issues/2188
- cmake -B build -S ${_pkg}-c-${pkgver} \
- -DCMAKE_INSTALL_PREFIX=/usr \
- -DCMAKE_INSTALL_LIBDIR=lib \
- -DCMAKE_BUILD_TYPE=Release \
- -DENABLE_BYTERANGE=ON \
- -DENABLE_CDF5=ON \
- -DENABLE_PNETCDF=ON \
- -DENABLE_DAP_LONG_TESTS=OFF \
- -DENABLE_DAP_REMOTE_TESTS=OFF \
- -DENABLE_EXAMPLE_TESTS=ON \
- -DENABLE_EXTRA_TESTS=ON \
- -DENABLE_FILTER_TESTING=ON \
- -DENABLE_LARGE_FILE_TESTS=ON \
- -DENABLE_UNIT_TESTS=ON
- make -C build
-}
-
-
-check() {
- # This is required starting with OpenMPI 3.0 when trying to run more
- # processes than the number of available cores
- export OMPI_MCA_rmaps_base_oversubscribe=yes
-
- # https://github.com/Unidata/netcdf-c/issues/2418
- make -C build test || echo "Tests failed"
-}
-
-package() {
- make -C build DESTDIR="${pkgdir}" install
- install -Dm644 ${_pkg}-c-${pkgver}/COPYRIGHT -t "${pkgdir}"/usr/share/licenses/${_pkg}/
-}
Copied: netcdf-openmpi/repos/community-x86_64/PKGBUILD (from rev 1239702, netcdf-openmpi/trunk/PKGBUILD)
===================================================================
--- PKGBUILD (rev 0)
+++ PKGBUILD 2022-06-27 15:39:37 UTC (rev 1239703)
@@ -0,0 +1,71 @@
+# Maintainer: Ronald van Haren <ronald.archlinux.org>
+# Maintainer: Bruno Pagani <archange at archlinux.org>
+# Contributor: damir <damir at archlinux.org>
+
+_pkg=netcdf
+_mpi=openmpi
+pkgname=${_pkg}-${_mpi}
+pkgver=4.9.0
+pkgrel=2
+pkgdesc="network Common Data Form interface for array-oriented data access and corresponding library with parallel support (${_mpi} version)"
+arch=(x86_64)
+url="https://www.unidata.ucar.edu/software/netcdf/"
+license=(custom)
+depends=("hdf5-${_mpi}" "pnetcdf-${_mpi}" curl libxml2)
+makedepends=(cmake)
+optdepends=('netcdf-fortran: fortran bindings' 'netcdf-cxx: c++ bindings')
+checkdepends=(inetutils unzip)
+provides=("${_pkg}")
+conflicts=("${_pkg}")
+options=(!makeflags)
+source=(https://github.com/Unidata/netcdf-c/archive/v${pkgver}/${pkgname}-${pkgver}.tar.gz
+ netcdf-4.9.0-fix-cmake-typo.patch::https://github.com/Unidata/netcdf-c/pull/2412.patch
+ netcdf-4.9.0-read-chunk-size.patch::https://github.com/Unidata/netcdf-c/pull/2319.patch)
+sha256sums=('9f4cb864f3ab54adb75409984c6202323d2fc66c003e5308f3cdf224ed41c0a6'
+ 'ed45ae6c49cf8dcddaadef4c5cf403049bf3f761187413d7b03754d319345d6a'
+ 'd71b441b6499d6ddb97ea25377018000781d16de6551f0d2ba33b9bcd6e769fd')
+prepare() {
+ # https://github.com/Unidata/netcdf-c/issues/2188 https://github.com/Unidata/netcdf-c/issues/2242
+ sed -i "/tst_remote3/d" ${_pkg}-c-${pkgver}/ncdap_test/CMakeLists.txt
+ # https://github.com/Unidata/netcdf-c/issues/2390
+ patch -p1 -d ${_pkg}-c-${pkgver} < netcdf-4.9.0-fix-cmake-typo.patch
+ # https://github.com/Unidata/netcdf-c/issues/2418
+ patch -p1 -d ${_pkg}-c-${pkgver} < netcdf-4.9.0-read-chunk-size.patch
+ # https://github.com/Unidata/netcdf-c/issues/24
+ sed -i "/run_pnetcdf_test/d" ${_pkg}-c-${pkgver}/nc_test/CMakeLists.txt
+}
+
+build() {
+ export CC=mpicc
+ cmake -B build -S ${_pkg}-c-${pkgver} \
+ -DCMAKE_INSTALL_PREFIX=/usr \
+ -DCMAKE_INSTALL_LIBDIR=lib \
+ -DCMAKE_BUILD_TYPE=Release \
+ -DENABLE_BYTERANGE=ON \
+ -DENABLE_CDF5=ON \
+ -DENABLE_PNETCDF=ON \
+ -DENABLE_DAP_LONG_TESTS=ON \
+ -DENABLE_DAP_REMOTE_TESTS=ON \
+ -DENABLE_EXAMPLE_TESTS=ON \
+ -DENABLE_EXTRA_TESTS=ON \
+ -DENABLE_FILTER_TESTING=ON \
+ -DENABLE_LARGE_FILE_TESTS=ON \
+ -DENABLE_UNIT_TESTS=ON
+ make -C build
+}
+
+
+check() {
+ # This is required starting with OpenMPI 3.0 when trying to run more
+ # processes than the number of available cores
+ export OMPI_MCA_rmaps_base_oversubscribe=yes
+ # We don’t have CUDA by default
+ export OMPI_MCA_opal_warn_on_missing_libcuda=0
+
+ make -C build test
+}
+
+package() {
+ make -C build DESTDIR="${pkgdir}" install
+ install -Dm644 ${_pkg}-c-${pkgver}/COPYRIGHT -t "${pkgdir}"/usr/share/licenses/${_pkg}/
+}
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